Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr family transcriptional regulator | DCP16_11305 | Not Available | Positive | 2432746 - 2433504 | 27436.8 |
| duf2334 domain-containing protein | DCP16_11310 | Not Available | Positive | 2433546 - 2434445 | 34330.7 |
| hypothetical protein | DCP16_11315 | Not Available | Positive | 2434472 - 2434771 | 10496.6 |
| cobalamin biosynthesis protein cobw | DCP16_11320 | Not Available | Positive | 2434771 - 2435832 | 37876.6 |
| short-chain dehydrogenase | DCP16_11325 | Not Available | Negative | 2435898 - 2436623 | 24972.2 |
| ribulokinase | DCP16_11330 | Not Available | Negative | 2436680 - 2438290 | 56339.8 |
| sdr family nad(p)-dependent oxidoreductase | DCP16_11335 | Not Available | Negative | 2438371 - 2439102 | 26348.9 |
| ribose abc transporter permease | DCP16_11340 | Not Available | Negative | 2439140 - 2440117 | 33143.1 |
| ribonucleotide-diphosphate reductase subunit alpha | DCP16_11345 | Not Available | Negative | 2440107 - 2441609 | 55306.4 |
| laci family transcriptional regulator | DCP16_11350 | Not Available | Negative | 2441738 - 2442649 | 31678.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
