Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DCP16_10160 | Not Available | Negative | 2160620 - 2161528 | 32187.8 |
| tetratricopeptide repeat protein | DCP16_10165 | Not Available | Negative | 2161535 - 2163370 | 66498.8 |
| polyprenyl synthetase | DCP16_10170 | Not Available | Negative | 2163620 - 2164636 | 36671.0 |
| hypothetical protein | DCP16_10175 | Not Available | Positive | 2164748 - 2164975 | 8355.1 |
| methyltransferase | DCP16_10180 | Not Available | Positive | 2164982 - 2165773 | 28585.1 |
| s49 family peptidase | DCP16_10185 | Not Available | Positive | 2165971 - 2166741 | 27545.6 |
| hypothetical protein | DCP16_10190 | Not Available | Positive | 2166756 - 2166950 | 7207.79 |
| duf2207 domain-containing protein | DCP16_10195 | Not Available | Negative | 2167046 - 2168953 | 69522.3 |
| duf2207 domain-containing protein | DCP16_10200 | Not Available | Negative | 2169091 - 2171013 | 68519.1 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DCP16_10205 | Not Available | Negative | 2171072 - 2172337 | 44188.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
