Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_01961 | DCP16_09960 | Not Available | Negative | 2120066 - 2120518 | Not Available |
| pseudouridine synthase | DCP16_09965 | Not Available | Positive | 2120591 - 2122603 | 72158.3 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | DCP16_09970 | Not Available | Positive | 2122603 - 2123160 | 20163.2 |
| patatin-like phospholipase family protein | DCP16_09975 | Not Available | Positive | 2123284 - 2124222 | 33754.5 |
| modulator protein | DCP16_09980 | Not Available | Positive | 2124314 - 2125660 | 47526.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | DCP16_09985 | Not Available | Positive | 2125751 - 2126557 | 29082.6 |
| duf4170 domain-containing protein | DCP16_09990 | Not Available | Positive | 2126629 - 2126865 | 8967.81 |
| 3-deoxy-d-manno-octulosonic acid transferase | DCP16_09995 | Not Available | Positive | 2127075 - 2128391 | 49098.4 |
| haloacid dehalogenase | DCP16_10000 | Not Available | Positive | 2128414 - 2129136 | 25011.7 |
| tetraacyldisaccharide 4'-kinase | DCP16_10005 | Not Available | Positive | 2129259 - 2130290 | 36873.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
