Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf305 domain-containing protein | DCP16_09860 | Not Available | Negative | 2101731 - 2102105 | 13436.2 |
| hypothetical protein | DCP16_09865 | Not Available | Negative | 2102162 - 2102524 | 12485.5 |
| hypothetical protein | DCP16_09870 | Not Available | Negative | 2102564 - 2103328 | 28794.6 |
| duf2798 domain-containing protein | DCP16_09875 | Not Available | Negative | 2103396 - 2103641 | 9108.71 |
| histidine--trna ligase | DCP16_09880 | Not Available | Positive | 2103922 - 2105439 | 55522.3 |
| glyoxalase | DCP16_09885 | Not Available | Positive | 2105446 - 2105814 | 13345.0 |
| atp phosphoribosyltransferase regulatory subunit | DCP16_09890 | Not Available | Positive | 2105831 - 2106952 | 40336.2 |
| atp phosphoribosyltransferase | DCP16_09895 | Not Available | Positive | 2106949 - 2107647 | 25244.1 |
| aldehyde-activating protein | DCP16_09900 | Not Available | Positive | 2107692 - 2108099 | 15185.0 |
| hypothetical protein | DCP16_09905 | Not Available | Negative | 2108150 - 2108596 | 15072.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
