Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | DCP16_09660 | Not Available | Negative | 2053027 - 2054313 | 46759.7 |
| glutamine synthetase | DCP16_09665 | Not Available | Negative | 2054324 - 2055760 | 53386.7 |
| aminoacetone oxidase family fad-binding enzyme | DCP16_09670 | Not Available | Positive | 2055888 - 2057072 | 42355.1 |
| lysr family transcriptional regulator | DCP16_09675 | Not Available | Positive | 2057685 - 2058554 | 32314.7 |
| hypothetical protein | DCP16_09680 | Not Available | Negative | 2058551 - 2058796 | 8720.39 |
| isocitrate lyase | DCP16_09685 | Not Available | Negative | 2058899 - 2060188 | 47007.6 |
| cro/cl family transcriptional regulator | DCP16_09690 | Not Available | Positive | 2060429 - 2061847 | 51664.3 |
| spermidine/putrescine abc transporter substrate-binding protein potf | DCP16_09695 | Not Available | Positive | 2062033 - 2063130 | 40332.8 |
| polyamine abc transporter atp-binding protein | DCP16_09700 | Not Available | Positive | 2063211 - 2064368 | 42846.9 |
| putrescine/spermidine abc transporter permease | DCP16_09705 | Not Available | Positive | 2064380 - 2065288 | 33751.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
