Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf952 domain-containing protein | DCP16_08960 | Not Available | Positive | 1896147 - 1896497 | 12651.0 |
| dihydroorotate dehydrogenase (quinone) | DCP16_08965 | Not Available | Positive | 1896500 - 1897588 | 38560.4 |
| cap domain-containing protein | DCP16_08970 | Not Available | Negative | 1897690 - 1898187 | 17508.2 |
| hypothetical protein | DCP16_08975 | Not Available | Negative | 1898189 - 1898452 | 9449.05 |
| sam-dependent methyltransferase | DCP16_08980 | Not Available | Positive | 1898667 - 1899611 | 33988.4 |
| membrane protein | DCP16_08985 | Not Available | Positive | 1899803 - 1900414 | 22277.8 |
| yitt family protein | DCP16_08990 | Not Available | Positive | 1900473 - 1901114 | 23265.1 |
| carboxymuconolactone decarboxylase family protein | DCP16_08995 | Not Available | Negative | 1901136 - 1901597 | 17145.6 |
| transcriptional regulator | DCP16_09000 | Not Available | Negative | 1901687 - 1902187 | 17533.2 |
| dna ligase-associated dexh box helicase | DCP16_09005 | Not Available | Positive | 1902316 - 1904814 | 92737.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
