Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | DCP16_08405 | Not Available | Positive | 1787325 - 1787837 | 19120.2 |
| methionyl-trna formyltransferase | DCP16_08410 | Not Available | Positive | 1787889 - 1788821 | 33370.8 |
| trna pseudouridine(38-40) synthase trua | DCP16_08415 | Not Available | Positive | 1788825 - 1789625 | 29575.2 |
| hypothetical protein | DCP16_08420 | Not Available | Negative | 1789643 - 1790239 | 22413.5 |
| succinyl-diaminopimelate desuccinylase | DCP16_08425 | Not Available | Negative | 1790223 - 1791419 | 42581.3 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DCP16_08430 | Not Available | Negative | 1791571 - 1792425 | 30529.4 |
| log family protein | DCP16_08435 | Not Available | Positive | 1792566 - 1793432 | 32316.9 |
| nucleoside hydrolase | DCP16_08440 | Not Available | Negative | 1793522 - 1794466 | 34319.6 |
| heat-shock protein hsp20 | DCP16_08445 | Not Available | Positive | 1794778 - 1795203 | 16019.2 |
| duf1150 domain-containing protein | DCP16_08450 | Not Available | Positive | 1795371 - 1795628 | 9426.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
