Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rrna maturation rnase ybey | DCP16_08355 | Not Available | Positive | 1777000 - 1777506 | 18756.2 |
| magnesium/cobalt efflux protein | DCP16_08360 | Not Available | Positive | 1777524 - 1778660 | 41783.4 |
| apolipoprotein n-acyltransferase | DCP16_08365 | Not Available | Positive | 1778952 - 1780544 | 57317.9 |
| xre family transcriptional regulator | DCP16_08370 | Not Available | Positive | 1780685 - 1781104 | 15180.1 |
| methionine adenosyltransferase | DCP16_08375 | Not Available | Positive | 1781278 - 1782543 | 45476.9 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DCP16_08380 | Not Available | Positive | 1782693 - 1783391 | 26698.9 |
| deor family transcriptional regulator | DCP16_08385 | Not Available | Negative | 1783394 - 1784149 | 26690.4 |
| gdp-mannose pyrophosphatase | DCP16_08390 | Not Available | Positive | 1784249 - 1784836 | 22162.2 |
| ribokinase | DCP16_08395 | Not Available | Negative | 1784868 - 1785767 | 30660.8 |
| dna recombination protein rmuc | DCP16_08400 | Not Available | Negative | 1785988 - 1787184 | 44444.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
