Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extradiol dioxygenase | DCP16_08305 | Not Available | Positive | 1768714 - 1769133 | 15349.1 |
| tryptophan--trna ligase | DCP16_08310 | Not Available | Positive | 1769215 - 1770279 | 38530.5 |
| universal stress protein | DCP16_08315 | Not Available | Positive | 1770452 - 1770943 | 17648.2 |
| nifu family protein | DCP16_08320 | Not Available | Positive | 1771144 - 1771707 | 20383.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DCP16_08325 | Not Available | Positive | 1771844 - 1772512 | 22789.2 |
| ribosomal-protein-alanine acetyltransferase | DCP16_08330 | Not Available | Positive | 1772602 - 1773096 | 18088.6 |
| transcriptional repressor | DCP16_08335 | Not Available | Positive | 1773165 - 1773593 | 16681.8 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DCP16_08340 | Not Available | Positive | 1773628 - 1774428 | 29191.1 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | DCP16_08345 | Not Available | Positive | 1774486 - 1775883 | 51908.4 |
| phosphate starvation-inducible protein phoh | DCP16_08350 | Not Available | Positive | 1775931 - 1776989 | 38543.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
