Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | DCP16_08255 | Not Available | Positive | 1755969 - 1756925 | 34790.2 |
| integration host factor subunit beta | DCP16_08260 | Not Available | Positive | 1756952 - 1757257 | 11394.5 |
| lapa family protein | DCP16_08265 | Not Available | Positive | 1757342 - 1757683 | 12415.4 |
| sam-dependent methyltransferase | DCP16_08270 | Not Available | Positive | 1757877 - 1759010 | 41680.8 |
| rna methyltransferase | DCP16_08275 | Not Available | Positive | 1759007 - 1759864 | 30796.4 |
| signal peptidase ii | DCP16_08280 | Not Available | Positive | 1759864 - 1760358 | 18262.9 |
| ornithine--acyl-acp n-acyltransferase olsb | DCP16_08285 | Not Available | Positive | 1760489 - 1761370 | 32674.3 |
| dna mismatch repair protein muts | DCP16_08290 | Not Available | Positive | 1761552 - 1764203 | 95782.0 |
| [protein-pii] uridylyltransferase | DCP16_08295 | Not Available | Positive | 1764289 - 1767117 | 106177.0 |
| murein biosynthesis integral membrane protein murj | DCP16_08300 | Not Available | Positive | 1767125 - 1768717 | 56868.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
