Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit beta | DCP16_00520 | Not Available | Positive | 107684 - 108937 | 45469.3 |
| hypothetical protein | DCP16_00525 | Not Available | Positive | 108940 - 109341 | 14240.1 |
| sarcosine oxidase subunit delta family protein | DCP16_00530 | Not Available | Positive | 109351 - 109665 | 12103.1 |
| sarcosine oxidase subunit alpha | DCP16_00535 | Not Available | Positive | 109662 - 112622 | 106372.0 |
| sarcosine oxidase subunit gamma | DCP16_00540 | Not Available | Positive | 112615 - 113163 | 19104.8 |
| amino acid permease | DCP16_00550 | Not Available | Negative | 113996 - 115366 | 47581.3 |
| hypothetical protein | DCP16_00555 | Not Available | Negative | 115338 - 115436 | 3413.34 |
| duf2332 domain-containing protein | DCP16_00560 | Not Available | Negative | 115561 - 116598 | 38322.3 |
| nodulation protein n | DCP16_00565 | Not Available | Negative | 116713 - 117198 | 17663.9 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 119320 - 119416 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
