Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-canonical purine ntp pyrophosphatase, rdgb/ham1 family | DCP16_08205 | Not Available | Negative | 1746924 - 1747568 | 22998.8 |
| ribonuclease ph | DCP16_08210 | Not Available | Negative | 1747582 - 1748298 | 26088.2 |
| heat-inducible transcriptional repressor hrca | DCP16_08215 | Not Available | Positive | 1748465 - 1749556 | 39672.8 |
| nucleotide exchange factor grpe | DCP16_08220 | Not Available | Positive | 1749723 - 1750355 | 22527.5 |
| pts iia-like nitrogen-regulatory protein ptsn | DCP16_08225 | Not Available | Negative | 1750567 - 1751028 | 16460.9 |
| ribosome-associated translation inhibitor raia | DCP16_08230 | Not Available | Negative | 1751097 - 1751672 | 21078.9 |
| rna polymerase sigma-54 factor | DCP16_08235 | Not Available | Negative | 1751897 - 1753438 | 56725.1 |
| lps export abc transporter atp-binding protein | DCP16_08240 | Not Available | Negative | 1753650 - 1754462 | 29663.9 |
| hypothetical protein | DCP16_08245 | Not Available | Negative | 1754473 - 1755045 | 20418.4 |
| lps export abc transporter periplasmic protein lptc | DCP16_08250 | Not Available | Negative | 1755058 - 1755723 | 23648.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
