Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate reductase | DCP16_08000 | Not Available | Negative | 1704352 - 1705179 | 28530.2 |
| abc transporter atp-binding protein | DCP16_08005 | Not Available | Negative | 1705197 - 1706981 | 64773.8 |
| glucokinase | DCP16_08010 | Not Available | Negative | 1707080 - 1708096 | 36062.3 |
| methylglyoxal synthase | DCP16_08015 | Not Available | Negative | 1708154 - 1708537 | 13967.9 |
| penicillin-insensitive murein endopeptidase | DCP16_08020 | Not Available | Negative | 1708619 - 1709668 | 37751.5 |
| hypothetical protein | DCP16_08025 | Not Available | Positive | 1709837 - 1711681 | 68440.9 |
| microcin c abc transporter permease yejb | DCP16_08030 | Not Available | Positive | 1711828 - 1712919 | 40152.4 |
| peptide abc transporter permease | DCP16_08035 | Not Available | Positive | 1712919 - 1714061 | 42254.6 |
| microcin abc transporter atp-binding protein | DCP16_08040 | Not Available | Positive | 1714067 - 1715719 | 60298.5 |
| amino acid dehydrogenase | DCP16_08045 | Not Available | Positive | 1715821 - 1717068 | 45787.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
