Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis protein thif | DCP16_07950 | Not Available | Negative | 1694070 - 1694828 | 27165.8 |
| dna replication/repair protein recf | DCP16_07955 | Not Available | Negative | 1694866 - 1695990 | 41025.8 |
| hypothetical protein | DCP16_07960 | Not Available | Positive | 1696193 - 1697302 | 39679.6 |
| nucleoside/nucleotide kinase family protein | DCP16_07965 | Not Available | Negative | 1697364 - 1697999 | 23292.7 |
| sugar abc transporter atp-binding protein | DCP16_07970 | Not Available | Negative | 1697996 - 1698778 | 28328.5 |
| abc transporter permease | DCP16_07975 | Not Available | Negative | 1698790 - 1699854 | 37180.2 |
| sugar abc transporter substrate-binding protein | DCP16_07980 | Not Available | Negative | 1699989 - 1701011 | 35113.1 |
| sugar kinase | DCP16_07985 | Not Available | Positive | 1701275 - 1702507 | 44607.8 |
| sulfolactate dehydrogenase | DCP16_07990 | Not Available | Negative | 1702533 - 1703522 | 34130.1 |
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | DCP16_07995 | Not Available | Negative | 1703698 - 1704333 | 23339.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
