Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination protein recr | DCP16_07850 | Not Available | Positive | 1672438 - 1673043 | 21419.1 |
| lytic murein transglycosylase | DCP16_07855 | Not Available | Positive | 1673066 - 1674331 | 45316.1 |
| gnat family n-acetyltransferase | DCP16_07860 | Not Available | Negative | 1674328 - 1674879 | 21179.1 |
| mfs transporter | DCP16_07865 | Not Available | Negative | 1674842 - 1676470 | 59425.2 |
| hypothetical protein | DCP16_07870 | Not Available | Positive | 1676449 - 1676757 | 11427.3 |
| ribosome maturation factor rimp | DCP16_07875 | Not Available | Positive | 1676757 - 1677341 | 21468.5 |
| transcription termination/antitermination protein nusa | DCP16_07880 | Not Available | Positive | 1677404 - 1679008 | 59838.9 |
| rna-binding protein | DCP16_07885 | Not Available | Positive | 1679005 - 1679697 | 24610.7 |
| translation initiation factor if-2 | DCP16_07890 | Not Available | Positive | 1679799 - 1682537 | 99200.3 |
| 30s ribosome-binding factor rbfa | DCP16_07895 | Not Available | Positive | 1682719 - 1683135 | 15612.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
