Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate metabolism protein/1,5-bisphosphokinase (prpp-forming) phnn | DCP16_07395 | Not Available | Positive | 1579088 - 1579633 | 19451.1 |
| lysr family transcriptional regulator | DCP16_07400 | Not Available | Negative | 1579643 - 1580524 | 32766.4 |
| antibiotic biosynthesis monooxygenase | DCP16_07405 | Not Available | Negative | 1580521 - 1580832 | 11927.6 |
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | DCP16_07410 | Not Available | Positive | 1580987 - 1582483 | 53276.2 |
| hypothetical protein | DCP16_07415 | Not Available | Negative | 1582711 - 1583277 | 20286.3 |
| urocanate hydratase | DCP16_07420 | Not Available | Negative | 1583281 - 1584966 | 61345.9 |
| n-formylglutamate deformylase | DCP16_07425 | Not Available | Negative | 1584979 - 1585779 | 29436.7 |
| histidine ammonia-lyase | DCP16_07430 | Not Available | Negative | 1585781 - 1587316 | 53101.5 |
| imidazolonepropionase | DCP16_07435 | Not Available | Negative | 1587320 - 1588564 | 44410.3 |
| formimidoylglutamate deiminase | DCP16_07440 | Not Available | Positive | 1588650 - 1589993 | 48304.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
