Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DCP16_07080 | Not Available | Negative | 1517977 - 1518843 | 31398.4 |
| dipeptide abc transporter permease dppc | DCP16_07085 | Not Available | Negative | 1518845 - 1519762 | 33043.3 |
| peptide abc transporter permease | DCP16_07090 | Not Available | Negative | 1519778 - 1520782 | 36204.9 |
| abc transporter substrate-binding protein | DCP16_07095 | Not Available | Negative | 1520930 - 1522528 | 59247.2 |
| superoxide dismutase | DCP16_07100 | Not Available | Negative | 1522838 - 1523530 | 25171.7 |
| sugar phosphate isomerase/epimerase | DCP16_07105 | Not Available | Positive | 1523812 - 1524864 | 38961.7 |
| oxidoreductase | DCP16_07110 | Not Available | Positive | 1524891 - 1526078 | 42448.2 |
| hypothetical protein | DCP16_07115 | Not Available | Negative | 1526140 - 1526337 | 6777.91 |
| porin family protein | DCP16_07120 | Not Available | Positive | 1526649 - 1527278 | 21787.5 |
| ba14k family protein | DCP16_07125 | Not Available | Negative | 1527343 - 1527657 | 10799.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
