Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | DCP16_06925 | Not Available | Positive | 1487891 - 1488793 | 33649.0 |
| carbohydrate abc transporter permease | DCP16_06930 | Not Available | Positive | 1488786 - 1489727 | 34773.5 |
| abc transporter atp-binding protein | DCP16_06935 | Not Available | Positive | 1489732 - 1490820 | 39819.4 |
| sugar phosphate isomerase/epimerase | DCP16_06940 | Not Available | Positive | 1490864 - 1491625 | 27955.8 |
| oxidoreductase | DCP16_06945 | Not Available | Positive | 1491748 - 1492881 | 40626.8 |
| alpha/beta hydrolase | DCP16_06950 | Not Available | Negative | 1492982 - 1493764 | 27906.1 |
| marr family transcriptional regulator | DCP16_06955 | Not Available | Positive | 1493905 - 1494372 | 16735.0 |
| tonb-dependent receptor | DCP16_06960 | Not Available | Negative | 1494457 - 1496952 | 90667.1 |
| hypothetical protein | DCP16_06965 | Not Available | Negative | 1497044 - 1497994 | 35009.8 |
| rna polymerase sigma factor | DCP16_06970 | Not Available | Negative | 1497991 - 1498515 | 19529.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
