Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | DCP16_00370 | Not Available | Positive | 76848 - 77357 | 17884.6 |
| transcriptional regulator | DCP16_00375 | Not Available | Positive | 77481 - 78503 | 36653.9 |
| 2-hydroxyacid dehydrogenase | DCP16_00380 | Not Available | Positive | 78679 - 79641 | 34316.3 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | DCP16_00385 | Not Available | Negative | 79679 - 80434 | 27102.1 |
| abc transporter substrate-binding protein | DCP16_00390 | Not Available | Positive | 80837 - 81943 | 40510.2 |
| hypothetical protein | DCP16_00395 | Not Available | Positive | 82051 - 82362 | 11960.8 |
| c4-dicarboxylate abc transporter | DCP16_00400 | Not Available | Negative | 82444 - 83946 | 53515.6 |
| sugar transporter | DCP16_00405 | Not Available | Negative | 83974 - 84513 | 20219.2 |
| aa3-type cytochrome c oxidase subunit iv | DCP16_00410 | Not Available | Positive | 84943 - 85164 | 7917.94 |
| hypothetical protein | DCP16_00415 | Not Available | Positive | 85250 - 85777 | 19538.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
