Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnaj | DCP16_06175 | Not Available | Negative | 1320648 - 1321274 | 23612.8 |
| hypothetical protein | DCP16_06180 | Not Available | Positive | 1321441 - 1321722 | 10384.4 |
| 3-dehydroquinate synthase | DCP16_06185 | Not Available | Negative | 1321754 - 1322884 | 39886.9 |
| shikimate kinase | DCP16_06190 | Not Available | Negative | 1322889 - 1323470 | 21505.2 |
| hypothetical protein | DCP16_06195 | Not Available | Positive | 1323758 - 1323910 | 5598.1 |
| site-specific tyrosine recombinase xerd | DCP16_06200 | Not Available | Positive | 1323925 - 1324878 | 35000.1 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | DCP16_06205 | Not Available | Positive | 1324942 - 1325895 | 34303.9 |
| hypothetical protein | DCP16_06210 | Not Available | Positive | 1326069 - 1326806 | 27805.0 |
| hypothetical protein | DCP16_06215 | Not Available | Positive | 1327027 - 1327311 | 9737.67 |
| hypothetical protein | DCP16_06220 | Not Available | Negative | 1327336 - 1327761 | 15817.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
