Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux rnd transporter permease subunit | DCP16_06075 | Not Available | Negative | 1296071 - 1299226 | 111945.0 |
| efflux transporter periplasmic adaptor subunit | DCP16_06080 | Not Available | Negative | 1299236 - 1300420 | 42265.8 |
| tetr/acrr family transcriptional regulator | DCP16_06085 | Not Available | Negative | 1300458 - 1301015 | 20416.3 |
| atp-binding protein | DCP16_06090 | Not Available | Negative | 1301313 - 1302071 | 27421.4 |
| cysteine abc transporter permease | DCP16_06095 | Not Available | Negative | 1302068 - 1302748 | 24703.8 |
| amino acid abc transporter substrate-binding protein | DCP16_06100 | Not Available | Negative | 1302859 - 1303644 | 27750.1 |
| catalase/peroxidase hpi | DCP16_06105 | Not Available | Positive | 1304034 - 1306217 | 80069.0 |
| abc transporter substrate-binding protein | DCP16_06110 | Not Available | Negative | 1306443 - 1307546 | 40019.6 |
| globin | DCP16_06115 | Not Available | Negative | 1307693 - 1308157 | 17284.5 |
| response regulator | DCP16_06120 | Not Available | Positive | 1308306 - 1308665 | 13330.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
