Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | DCP16_05975 | Not Available | Negative | 1278102 - 1279463 | 48765.1 |
| adenylate cyclase | DCP16_05980 | Not Available | Negative | 1279666 - 1280688 | 36898.7 |
| ribonuclease d | DCP16_05985 | Not Available | Negative | 1280865 - 1282034 | 43478.2 |
| hypothetical protein | DCP16_05990 | Not Available | Negative | 1282067 - 1282327 | 9964.44 |
| aspartate--trna ligase | DCP16_05995 | Not Available | Positive | 1282322 - 1284109 | 66751.6 |
| fusc family protein | DCP16_06000 | Not Available | Positive | 1284250 - 1284693 | 15424.6 |
| hypothetical protein | DCP16_06005 | Not Available | Negative | 1284797 - 1285432 | 22988.6 |
| 50s ribosomal protein l28 | DCP16_06010 | Not Available | Negative | 1285624 - 1285914 | 10693.0 |
| duf3108 domain-containing protein | DCP16_06015 | Not Available | Positive | 1286165 - 1286938 | 28029.5 |
| cupin domain-containing protein | DCP16_06020 | Not Available | Negative | 1286950 - 1287381 | 15634.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
