Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin synthase catalytic subunit | DCP16_05875 | Not Available | Negative | 1256838 - 1257299 | 16538.6 |
| molybdopterin converting factor subunit 1 | DCP16_05880 | Not Available | Negative | 1257303 - 1257557 | 9538.42 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | DCP16_05885 | Not Available | Negative | 1257557 - 1258144 | 21511.7 |
| excinuclease abc subunit c | DCP16_05890 | Not Available | Negative | 1258247 - 1260175 | 71722.7 |
| short chain dehydrogenase | DCP16_05895 | Not Available | Negative | 1260286 - 1261053 | 27681.0 |
| hypothetical protein | DCP16_05900 | Not Available | Positive | 1261423 - 1262073 | 22563.0 |
| glutathione s-transferase | DCP16_05905 | Not Available | Negative | 1262147 - 1262740 | 22289.9 |
| ribonuclease | DCP16_05910 | Not Available | Negative | 1262758 - 1263486 | 26209.0 |
| upf0104 family protein | DCP16_05915 | Not Available | Positive | 1263691 - 1264647 | 35201.4 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | DCP16_05920 | Not Available | Negative | 1264654 - 1265502 | 32328.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
