Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| x-pro dipeptidase | DCP16_05720 | Not Available | Negative | 1223831 - 1224973 | 41316.3 |
| virulence factor family protein | DCP16_05725 | Not Available | Negative | 1225164 - 1226528 | 49020.2 |
| bifunctional lysylphosphatidylglycerol flippase/synthetase mprf | DCP16_05730 | Not Available | Negative | 1226525 - 1229125 | 94331.7 |
| membrane dipeptidase | DCP16_05735 | Not Available | Negative | 1229273 - 1230310 | 37397.5 |
| serine hydrolase | DCP16_05740 | Not Available | Positive | 1230421 - 1231953 | 55155.7 |
| mfs transporter | DCP16_05745 | Not Available | Negative | 1231943 - 1233391 | 51014.9 |
| lysr family transcriptional regulator | DCP16_05750 | Not Available | Positive | 1233620 - 1234501 | 31727.4 |
| d-amino-acid transaminase | DCP16_05755 | Not Available | Negative | 1234518 - 1235384 | 31833.2 |
| nitrilotriacetate monooxygenase | DCP16_05760 | Not Available | Negative | 1235513 - 1236817 | 47705.4 |
| mmge/prpd family protein | DCP16_05765 | Not Available | Negative | 1236833 - 1238179 | 46968.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
