Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DCP16_05670 | Not Available | Positive | 1214035 - 1214745 | 25831.9 |
| d-amino acid dehydrogenase | DCP16_05675 | Not Available | Negative | 1214783 - 1216039 | 45087.5 |
| alanine racemase | DCP16_05680 | Not Available | Negative | 1216047 - 1217213 | 40963.4 |
| lrp/asnc family transcriptional regulator | DCP16_05685 | Not Available | Positive | 1217341 - 1217817 | 17556.1 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | DCP16_05690 | Not Available | Negative | 1217831 - 1218631 | 27618.5 |
| thiamine phosphate synthase | DCP16_05695 | Not Available | Negative | 1218628 - 1219287 | 22957.6 |
| hydroxyethylthiazole kinase | DCP16_05700 | Not Available | Negative | 1219274 - 1220014 | 26216.5 |
| hypothetical protein | DCP16_05705 | Not Available | Positive | 1220394 - 1221062 | 25068.2 |
| lysr family transcriptional regulator | DCP16_05710 | Not Available | Negative | 1221181 - 1222188 | 35878.5 |
| protelomerase | DCP16_05715 | Not Available | Negative | 1222404 - 1223741 | 50702.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
