Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCP16_05570 | Not Available | Negative | 1190497 - 1190715 | 8441.04 |
| hypothetical protein | DCP16_05575 | Not Available | Positive | 1190875 - 1191258 | 13712.4 |
| inositol 2-dehydrogenase | DCP16_05580 | Not Available | Positive | 1191514 - 1192506 | 35380.0 |
| 5-deoxy-glucuronate isomerase | DCP16_05585 | Not Available | Negative | 1192581 - 1193390 | 29947.1 |
| myo-inosose-2 dehydratase | DCP16_05590 | Not Available | Negative | 1193407 - 1194306 | 32845.1 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) | DCP16_05595 | Not Available | Negative | 1194309 - 1196132 | 65563.0 |
| 5-dehydro-2-deoxygluconokinase | DCP16_05600 | Not Available | Negative | 1196129 - 1198051 | 70208.4 |
| rpir family transcriptional regulator | DCP16_05605 | Not Available | Negative | 1198170 - 1198985 | 29530.5 |
| acetyl/propionyl-coa carboxylase subunit alpha | DCP16_05610 | Not Available | Negative | 1199085 - 1201088 | 72633.0 |
| methylmalonyl-coa carboxyltransferase | DCP16_05615 | Not Available | Negative | 1201100 - 1202632 | 55857.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
