Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | DCP16_05215 | Not Available | Negative | 1121319 - 1121957 | 22834.3 |
| paai family thioesterase | DCP16_05220 | Not Available | Negative | 1121947 - 1122405 | 16688.3 |
| fad-dependent oxidoreductase | DCP16_05225 | Not Available | Negative | 1122517 - 1124319 | 66958.6 |
| zinc-binding dehydrogenase | DCP16_05230 | Not Available | Negative | 1124435 - 1125508 | 38274.0 |
| sigma-54-dependent fis family transcriptional regulator | DCP16_05235 | Not Available | Negative | 1125663 - 1127546 | 68905.5 |
| tryptophan-rich sensory protein | DCP16_05240 | Not Available | Negative | 1127771 - 1128226 | 16959.5 |
| duf1513 domain-containing protein | DCP16_05245 | Not Available | Negative | 1128277 - 1129368 | 39376.5 |
| hypothetical protein | DCP16_05250 | Not Available | Negative | 1129370 - 1130491 | 40994.1 |
| thiol oxidoreductase | DCP16_05255 | Not Available | Negative | 1130491 - 1132011 | 54555.2 |
| peptidase | DCP16_05260 | Not Available | Negative | 1132108 - 1133385 | 45699.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
