Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DCP16_04810 | Not Available | Negative | 1028895 - 1029512 | 20783.9 |
| molybdopterin-binding protein | DCP16_04815 | Not Available | Negative | 1029604 - 1030380 | 28744.3 |
| hypothetical protein | DCP16_04820 | Not Available | Negative | 1030377 - 1031231 | 31864.1 |
| hypothetical protein | DCP16_04825 | Not Available | Negative | 1031310 - 1031570 | 9413.77 |
| rna polymerase subunit sigma-70 | DCP16_04830 | Not Available | Positive | 1031765 - 1032319 | 20821.1 |
| hypothetical protein | DCP16_04835 | Not Available | Positive | 1032303 - 1032947 | 23102.2 |
| duf1488 domain-containing protein | DCP16_04845 | Not Available | Positive | 1033895 - 1034161 | 10020.0 |
| formyltetrahydrofolate deformylase | DCP16_04850 | Not Available | Negative | 1034897 - 1035781 | 32837.3 |
| type iii glutamate--ammonia ligase | DCP16_04855 | Not Available | Negative | 1035866 - 1037173 | 48173.2 |
| fmn-binding glutamate synthase family protein | DCP16_04860 | Not Available | Negative | 1037262 - 1038590 | 47185.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
