Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas sp. TPD3009 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas sp. TPD3009 Contig_8, whole genome shotgun sequence.
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | DCP16_00170 | Not Available | Positive | 33276 - 34586 | 49325.3 |
| arac family transcriptional regulator | DCP16_00175 | Not Available | Negative | 34842 - 35852 | 37166.7 |
| alpha/beta hydrolase | DCP16_00180 | Not Available | Positive | 35971 - 36963 | 35636.0 |
| qace family quaternary ammonium compound efflux smr transporter | DCP16_00185 | Not Available | Positive | 37106 - 37438 | 11529.6 |
| nad(p)h-dependent oxidoreductase | DCP16_00190 | Not Available | Positive | 37581 - 38213 | 24070.8 |
| methionine abc transporter atp-binding protein | DCP16_00195 | Not Available | Positive | 38542 - 39582 | 36607.4 |
| abc transporter permease | DCP16_00200 | Not Available | Positive | 39572 - 40240 | 23176.4 |
| metq/nlpa family abc transporter substrate-binding protein | DCP16_00205 | Not Available | Positive | 40297 - 41073 | 27727.1 |
| bifunctional diguanylate cyclase/phosphodiesterase | DCP16_00210 | Not Available | Positive | 41309 - 43477 | 78337.5 |
| hypothetical protein | DCP16_00215 | Not Available | Negative | 43490 - 44476 | 36811.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
