Chitinophaga parva strain LY-1

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga parva strain LY-1 is a Gram-negative, rod-shaped bacterium. This strain is characterized by having a single replicon, which indicates a streamlined genetic organization. The genomic information for this strain is recorded under the accession number QCYK00000000.1. In terms of ecological significance, members of the genus Chitinophaga are known for their ability to degrade chitin, a biopolymer found in the exoskeletons of arthropods and the cell walls of fungi. This capability suggests that Chitinophaga parva strain LY-1 may play a role in nutrient cycling within its habitat, potentially contributing to the decomposition of organic matter. Through the breakdown of chitin, this bacterium could help facilitate the recycling of nitrogen and carbon in ecosystems where it is present. Understanding the specific characteristics and ecological roles of Chitinophaga parva strain LY-1 enhances our knowledge of microbial diversity and the functional roles of bacteria in environmental processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga parva
Strainstrain LY-1

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga parva strain LY-1 Scaffold11_1, whole genome shotgun

Gene Summary

Adenine Count

1462274 bp

Thymine Count

1477426 bp

Guanine Count

1633585 bp

Cytosine Count

1572775 bp

Genome Length

6146060 bp

Protein-coding Genes

4933 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
deoxyguanosinetriphosphate triphosphohydrolaseDCC81_06225Not AvailablePositive1458770 - 146011050914.7
dihydroorotate dehydrogenase (quinone)DCC81_06230Not AvailableNegative1460159 - 146118437225.2
rna polymerase sigma-70 factorDCC81_06235Not AvailablePositive1461204 - 146186024694.9
hypothetical proteinDCC81_06240Not AvailablePositive1461995 - 146296635729.6
cyclic nucleotide-binding proteinDCC81_06245Not AvailablePositive1463187 - 146375621845.3
zn-dependent oxidoreductaseDCC81_06250Not AvailablePositive1463788 - 146488539095.3
sulfite exporter taue/safe family proteinDCC81_06255Not AvailablePositive1465045 - 146613338009.0
arginaseDCC81_06260Not AvailablePositive1466613 - 146752432985.6
laci family transcriptional regulatorDCC81_06265Not AvailablePositive1467583 - 146859637508.9
susc/raga family proteinDCC81_06270Not AvailablePositive1469469 - 1472426107113.0

Displaying genes 1281 – 1290 of 5015 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.