Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pelagivirga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pelagivirga |
| Species | Pelagivirga sediminicola |
| Strain | strain BH-SD19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
714572 bp
Thymine Count
720933 bp
Guanine Count
1280151 bp
Cytosine Count
1266141 bp
Genome Length
3981807 bp
Protein-coding Genes
3718 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ring-hydroxylating oxygenase subunit alpha | DC366_01235 | Not Available | Positive | 263307 - 264515 | 46195.4 |
| spermidine/putrescine abc transporter | DC366_01240 | Not Available | Positive | 264664 - 265455 | 29044.5 |
| spermidine/putrescine abc transporter | DC366_01245 | Not Available | Positive | 265455 - 266288 | 30213.9 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | DC366_01250 | Not Available | Positive | 266291 - 267394 | 39647.8 |
| eama family transporter | DC366_01255 | Not Available | Positive | 267646 - 268545 | 30904.0 |
| polyamine abc transporter substrate-binding protein | DC366_01260 | Not Available | Negative | 268616 - 269713 | 40517.9 |
| qace family quaternary ammonium compound efflux smr transporter | DC366_01265 | Not Available | Positive | 269975 - 270295 | 11257.3 |
| aminotransferase | DC366_01270 | Not Available | Negative | 270339 - 271715 | 50655.6 |
| tetr family transcriptional regulator | DC366_01275 | Not Available | Positive | 271858 - 272559 | 26111.8 |
| ribosomal subunit interface protein | DC366_01280 | Not Available | Negative | 272546 - 273733 | 43944.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
