Marivita sp. XM-24bin2

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Marivita

Description

Marivita sp. XM-24bin2 is a Gram-negative, rod-shaped bacterium characterized by a single replicon. The designation of Marivita indicates that it belongs to a genus known for its diverse ecological roles, often associated with marine environments. The organism is cataloged under the accession number QCWH00000000.1, which provides a reference point for genetic and genomic studies. Being Gram-negative, Marivita sp. XM-24bin2 possesses a cell wall structure that includes an outer membrane, which is a characteristic feature of this classification. This structural composition is associated with various physiological traits, including an increased resistance to certain antibiotics compared to Gram-positive bacteria. The presence of a single replicon suggests a streamlined genomic organization, which can be indicative of the organism's adaptability and efficiency in its ecological niche. This trait may also reflect a potential specialization in nutrient acquisition or metabolic pathways that could be advantageous in the environments where Marivita sp. XM-24bin2 is found. In summary, Marivita sp. XM-24bin2 exemplifies the characteristics of Gram-negative bacteria, with its rod shape and single replicon structure. Understanding its traits contributes to the broader knowledge of microbial diversity and adaptation, particularly in marine ecosystems where such organisms play crucial roles in nutrient cycling and ecosystem functioning.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusMarivita
SpeciesMarivita sp. XM-24bin2
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: Marivita sp. XM-24bin2 scaffold1876, whole genome shotgun

Gene Summary

Adenine Count

896972 bp

Thymine Count

901098 bp

Guanine Count

1284370 bp

Cytosine Count

1282520 bp

Genome Length

4431730 bp

Protein-coding Genes

4223 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseDCO97_00510Not AvailableNegative96993 - 9755620935.2
nyn domain-containing proteinDCO97_00515Not AvailablePositive97708 - 9828022049.4
hypothetical proteinDCO97_00520Not AvailablePositive98306 - 9874316208.2
mfs transporterDCO97_00525Not AvailableNegative98724 - 9997744668.4
cytochrome cDCO97_00530Not AvailableNegative100057 - 10053017222.4
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseDCO97_00535Not AvailablePositive100664 - 10161434445.6
atp-dependent rna helicaseDCO97_00540Not AvailableNegative101680 - 10383977751.8
lyse family translocatorDCO97_00545Not AvailablePositive103951 - 10456521721.3
duf3429 domain-containing proteinDCO97_00550Not AvailablePositive104603 - 10505515961.1
sam-dependent methyltransferaseDCO97_00555Not AvailablePositive105052 - 10564220990.6

Displaying genes 121 – 130 of 4279 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.