Pseudomonas sp. GV105

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. GV105 is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. This strain is cataloged under the accession QBUF00000000.1, which provides a reference point for further genomic studies and comparisons within the Pseudomonas genus. As a member of the Pseudomonas genus, GV105 likely shares the metabolic versatility and ecological resilience typical of this group. Pseudomonas species are known for their ability to degrade a wide range of organic compounds, which plays a significant role in bioremediation processes. The single replicon may suggest an evolutionary adaptation that allows for efficient replication and gene expression in fluctuating environmental conditions. The ecological insight derived from studying Pseudomonas sp. GV105 lies in its potential applications in environmental microbiology. Understanding the genetic and metabolic capabilities of this strain could facilitate its use in biotechnological applications, such as the biodegradation of pollutants or the promotion of plant growth through beneficial interactions in soil ecosystems. Thus, the characteristics of Pseudomonas sp. GV105 may serve as a valuable asset in both environmental remediation efforts and sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. GV105
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. GV105
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. GV105 Ga0189758_140, whole genome shotgun

Gene Summary

Adenine Count

1273657 bp

Thymine Count

1283818 bp

Guanine Count

2020477 bp

Cytosine Count

2013127 bp

Genome Length

6591772 bp

Protein-coding Genes

5865 genes

Non-Coding Genes

153 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cysteine desulfuration protein sufeC8K66_11245Not AvailableNegative4780158 - 478056514882.9
cysteine sulfinate desulfinaseC8K66_11246Not AvailableNegative4780562 - 478176743248.8
2,3,4,5-tetrahydropyridine-2-carboxylate n-succinyltransferaseC8K66_11247Not AvailableNegative4781832 - 478286636039.3
spx/mgsr family transcriptional regulatorC8K66_11248Not AvailableNegative4782899 - 478326113795.6
sodium/proton antiporter (cpa1 family)C8K66_11249Not AvailablePositive4783474 - 478511759948.9
astacin (peptidase family m12a)C8K66_11250Not AvailableNegative4785162 - 478594428886.4
astacin (peptidase family m12a)C8K66_11251Not AvailableNegative4786058 - 478677126407.9
succinyldiaminopimelate aminotransferaseC8K66_11252Not AvailableNegative4786861 - 478806044028.7
utp--glnb (protein pii) uridylyltransferase glndC8K66_11253Not AvailableNegative4788100 - 4790802102962.0
methionine aminopeptidase type iC8K66_11254Not AvailableNegative4790867 - 479164928556.5

Displaying genes 4431 – 4440 of 6018 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.