Pseudomonas sp. GV105

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. GV105 is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. This strain is cataloged under the accession QBUF00000000.1, which provides a reference point for further genomic studies and comparisons within the Pseudomonas genus. As a member of the Pseudomonas genus, GV105 likely shares the metabolic versatility and ecological resilience typical of this group. Pseudomonas species are known for their ability to degrade a wide range of organic compounds, which plays a significant role in bioremediation processes. The single replicon may suggest an evolutionary adaptation that allows for efficient replication and gene expression in fluctuating environmental conditions. The ecological insight derived from studying Pseudomonas sp. GV105 lies in its potential applications in environmental microbiology. Understanding the genetic and metabolic capabilities of this strain could facilitate its use in biotechnological applications, such as the biodegradation of pollutants or the promotion of plant growth through beneficial interactions in soil ecosystems. Thus, the characteristics of Pseudomonas sp. GV105 may serve as a valuable asset in both environmental remediation efforts and sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. GV105
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. GV105
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. GV105 Ga0189758_140, whole genome shotgun

Gene Summary

Adenine Count

1273657 bp

Thymine Count

1283818 bp

Guanine Count

2020477 bp

Cytosine Count

2013127 bp

Genome Length

6591772 bp

Protein-coding Genes

5865 genes

Non-Coding Genes

153 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adenylosuccinate lyaseC8K66_106228Not AvailableNegative2969761 - 297113150631.7
high frequency lysogenization proteinC8K66_106229Not AvailableNegative2971257 - 297188023157.4
trna (5-methylaminomethyl-2-thiouridylate)-methyltransferaseC8K66_106230Not AvailableNegative2971877 - 297300141707.4
adp-ribose pyrophosphatase yjhb (nudix family)C8K66_106231Not AvailableNegative2973061 - 297350716849.2
isocitrate dehydrogenaseC8K66_106232Not AvailableNegative2973663 - 297588880169.9
isocitrate dehydrogenase (nadp)C8K66_106233Not AvailablePositive2976394 - 297765045503.9
putative cold-shock dna-binding proteinC8K66_106234Not AvailableNegative2977730 - 29780089859.88
atp-dependent clp protease adapter protein clpsC8K66_106235Not AvailablePositive2978356 - 29786019329.26
atp-dependent clp protease atp-binding subunit clpaC8K66_106236Not AvailablePositive2978631 - 298090183296.7
translation initiation factor 1 (bif-1)C8K66_106237Not AvailableNegative2981087 - 29813058303.06

Displaying genes 2811 – 2820 of 6018 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.