Pseudomonas sp. GV105

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. GV105 is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. This strain is cataloged under the accession QBUF00000000.1, which provides a reference point for further genomic studies and comparisons within the Pseudomonas genus. As a member of the Pseudomonas genus, GV105 likely shares the metabolic versatility and ecological resilience typical of this group. Pseudomonas species are known for their ability to degrade a wide range of organic compounds, which plays a significant role in bioremediation processes. The single replicon may suggest an evolutionary adaptation that allows for efficient replication and gene expression in fluctuating environmental conditions. The ecological insight derived from studying Pseudomonas sp. GV105 lies in its potential applications in environmental microbiology. Understanding the genetic and metabolic capabilities of this strain could facilitate its use in biotechnological applications, such as the biodegradation of pollutants or the promotion of plant growth through beneficial interactions in soil ecosystems. Thus, the characteristics of Pseudomonas sp. GV105 may serve as a valuable asset in both environmental remediation efforts and sustainable agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. GV105
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. GV105
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. GV105 Ga0189758_140, whole genome shotgun

Gene Summary

Adenine Count

1273657 bp

Thymine Count

1283818 bp

Guanine Count

2020477 bp

Cytosine Count

2013127 bp

Genome Length

6591772 bp

Protein-coding Genes

5865 genes

Non-Coding Genes

153 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acetyl-gamma-glutamyl-phosphate reductaseC8K66_105415Not AvailablePositive2712772 - 271380636643.3
iron-sulfur cluster insertion apoprotein erpaC8K66_105416Not AvailablePositive2713972 - 271432212515.5
anhydro-n-acetylmuramic acid kinaseC8K66_105417Not AvailableNegative2714401 - 271549238684.6
murein dd-endopeptidase mepm/ murein hydrolase activator nlpdC8K66_105418Not AvailableNegative2715496 - 271691451058.7
tyrosyl-trna synthetaseC8K66_105419Not AvailablePositive2717124 - 271832344048.3
putative zn finger-like uncharacterized proteinC8K66_1061Not AvailableNegative2718453 - 27186195982.47
hypothetical proteinC8K66_1062Not AvailableNegative2718767 - 271912613733.3
type vi secretion system secreted protein hcpC8K66_1063Not AvailablePositive2719240 - 271952110025.0
uncharacterized protein duf1835C8K66_1064Not AvailableNegative2719641 - 272084645025.8
putative abc transport system atp-binding proteinC8K66_1065Not AvailablePositive2721103 - 272178024686.4

Displaying genes 2581 – 2590 of 6018 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.