Helicobacter pylori strain 3843

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain 3843 is a Gram-negative, microaerophilic bacterium characterized by a spirilla shape and the presence of flagella. It typically exists as single cells and thrives at an optimal temperature of 37°C, falling within the mesophilic temperature range. This strain has a single replicon and is surrounded by two membranes, which is characteristic of Gram-negative bacteria. H. pylori strain 3843 is predominantly associated with various hosts, including Homo sapiens, Gallus gallus, and several other vertebrates, indicating a diverse ecological presence. It is classified as free-living, suggesting it can exist independently within the gastrointestinal tract of its hosts. The bacterium is notably pathogenic to humans and is linked to a variety of significant health issues, including chronic gastric inflammation, gastric ulcers, and several forms of gastric cancer, such as gastric adenocarcinoma and mucosa-associated lymphoid tissue lymphoma. Other associated conditions include functional dyspepsia, atrophic gastritis, and gastrointestinal diseases. The presence of H. pylori can lead to a spectrum of diseases, ranging from asymptomatic mucosal inflammatory responses to severe conditions like gastric carcinoma. The ability of H. pylori strain 3843 to thrive in the gastric environment underscores its role in the pathogenesis of gastrointestinal diseases, highlighting the complex interactions between this bacterium and the host's immune response. Understanding these dynamics is crucial for addressing the health impacts associated with H. pylori infections.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain 3843

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain 3843
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain 3843 NODE_275_length_2347_cov_7.165318,

Gene Summary

Adenine Count

450415 bp

Thymine Count

453577 bp

Guanine Count

293164 bp

Cytosine Count

292898 bp

Genome Length

1490309 bp

Protein-coding Genes

1476 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipid a biosynthesis lauroyl acyltransferaseC2R70_00350Not AvailableNegative75903 - 7688938649.6
lipopolysaccharide heptosyltransferase iC2R70_00355Not AvailableNegative76886 - 7790838459.4
exopolyphosphataseC2R70_00360Not AvailableNegative77905 - 7830014731.4
gtpaseC2R70_00365Not AvailablePositive78387 - 7885117338.1
hypothetical proteinC2R70_00370Not AvailablePositive78778 - 7959029458.0
rod shape-determining protein rodaC2R70_00375Not AvailablePositive79613 - 8075843194.6
Trna-metNot AvailableNot AvailablePositive80720 - 80796Not Available
ribose-phosphate pyrophosphokinaseC2R70_00385Not AvailableNegative80819 - 8177534826.7
hit family hydrolaseC2R70_00390Not AvailableNegative81840 - 8232518389.4
udp-murnac-pentapeptide presynthetase murfC2R70_00395Not AvailableNegative82335 - 8381656070.2

Displaying genes 71 – 80 of 1514 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total