Helicobacter pylori strain 3843

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain 3843 is a Gram-negative, microaerophilic bacterium characterized by a spirilla shape and the presence of flagella. It typically exists as single cells and thrives at an optimal temperature of 37°C, falling within the mesophilic temperature range. This strain has a single replicon and is surrounded by two membranes, which is characteristic of Gram-negative bacteria. H. pylori strain 3843 is predominantly associated with various hosts, including Homo sapiens, Gallus gallus, and several other vertebrates, indicating a diverse ecological presence. It is classified as free-living, suggesting it can exist independently within the gastrointestinal tract of its hosts. The bacterium is notably pathogenic to humans and is linked to a variety of significant health issues, including chronic gastric inflammation, gastric ulcers, and several forms of gastric cancer, such as gastric adenocarcinoma and mucosa-associated lymphoid tissue lymphoma. Other associated conditions include functional dyspepsia, atrophic gastritis, and gastrointestinal diseases. The presence of H. pylori can lead to a spectrum of diseases, ranging from asymptomatic mucosal inflammatory responses to severe conditions like gastric carcinoma. The ability of H. pylori strain 3843 to thrive in the gastric environment underscores its role in the pathogenesis of gastrointestinal diseases, highlighting the complex interactions between this bacterium and the host's immune response. Understanding these dynamics is crucial for addressing the health impacts associated with H. pylori infections.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain 3843

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain 3843
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain 3843 NODE_275_length_2347_cov_7.165318,

Gene Summary

Adenine Count

450415 bp

Thymine Count

453577 bp

Guanine Count

293164 bp

Cytosine Count

292898 bp

Genome Length

1490309 bp

Protein-coding Genes

1476 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcription termination/antitermination protein nusaC2R70_03535Not AvailableNegative668921 - 67010844718.4
l-seryl-trna(sec) selenium transferaseC2R70_03540Not AvailableNegative670209 - 67136943908.6
tonb-dependent receptorC2R70_03545Not AvailableNegative671597 - 67423697598.2
iron-regulated proteinC2R70_03550Not AvailableNegative674390 - 67471612569.2
dihydroneopterin aldolaseC2R70_03555Not AvailableNegative674700 - 67505313646.6
glycerol-3-phosphate 1-o-acyltransferase plsyC2R70_03560Not AvailableNegative675050 - 67583828905.8
cytochrome c oxidase accessory protein ccogC2R70_03565Not AvailablePositive675818 - 67719452808.3
saccharopine dehydrogenaseC2R70_03570Not AvailableNegative677204 - 67840345100.4
sodium/glutamate symporterC2R70_03575Not AvailablePositive678490 - 67971644017.2
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductaseC2R70_03580Not AvailablePositive679713 - 68074739001.5

Displaying genes 661 – 670 of 1514 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total