Helicobacter pylori strain 18:2

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain 18:2 is a Gram-negative bacterium that is microaerophilic and exhibits a spirilla shape. This strain is characterized by its single-cell arrangement and presence of flagella, which facilitates its motility. It has a mesophilic temperature range, with an optimal growth temperature of 37°C. The bacterium is associated with various hosts, including Homo sapiens, Gallus gallus (chickens), and various other mammals and amoebas. Strain 18:2 has significant pathogenic implications for human health. It is well-documented for its role in causing chronic gastric inflammation and is associated with numerous gastrointestinal diseases, including gastric ulcers, peptic ulcer disease, and different forms of gastric cancer, such as gastric adenocarcinoma and mucosa-associated lymphoid tissue (MALT) lymphoma. The strain's presence can lead to asymptomatic mucosal inflammatory responses, chronic gastritis, and complications like hypochlorhydria and functional dyspepsia. The biotic relationship of Helicobacter pylori strain 18:2 is classified as free-living, indicating its ability to thrive in association with various hosts. The pathogenicity of this strain is particularly notable in humans, where it can lead to significant health issues, including cancer. Understanding the ecological and biological characteristics of Helicobacter pylori strain 18:2 is crucial for developing effective treatment and prevention strategies for the diseases it causes, emphasizing the importance of studying its interactions with different hosts and its impact on human health.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
Strainstrain 18:2

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Helicobacter pylori strain 18:2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Aves
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain 18:2


Gene Summary

Adenine Count

500659 bp

Thymine Count

505581 bp

Guanine Count

316432 bp

Cytosine Count

323783 bp

Genome Length

1646455 bp

Protein-coding Genes

1505 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive16132 - 16447Not Available
alpha-1,2-fucosyltransferaseC2S19_00105Not AvailablePositive16957 - 1739717173.8
site-specific dna-methyltransferaseC2S19_00110Not AvailableNegative17420 - 1825031772.2
restriction endonucleaseC2S19_00115Not AvailableNegative18244 - 184859244.83
formamidaseC2S19_00120Not AvailablePositive18647 - 1965137276.6
Ncrna_class:srp_rnaNot AvailableNot AvailablePositive19208 - 19305Not Available
hypothetical proteinC2S19_00125Not AvailableNegative19731 - 199889604.72
septum formation inhibitor mafC2S19_00130Not AvailableNegative20102 - 2067421214.8
alanine--trna ligaseC2S19_00135Not AvailableNegative20676 - 2321995036.7
duf465 domain-containing proteinC2S19_00140Not AvailablePositive23339 - 235699111.73

Displaying genes 21 – 30 of 1547 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

26 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002759dTDP-beta-L-rhamnoseC16H24N2O15P2Not availableNot available
Average546.316Da
Monoisotopic546.066289237Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003491(2S)-2-acetolactateC5H7O4Chemical structure of (2S)-2-acetolactateNot available
Average131.108Da
Monoisotopic131.0349823Da
BASm0003686(2E,6E,10E)-geranylgeranyl diphosphateC20H33O7P2Chemical structure of (2E,6E,10E)-geranylgeranyl diphosphateNot available
Average447.426Da
Monoisotopic447.171798138Da
BASm0003761dehypoxanthine futalosineC14H16O7Chemical structure of dehypoxanthine futalosineNot available
Average296.275Da
Monoisotopic296.0896029Da
BASm0003983di-trans,octa-cis-undecaprenyl phosphateC55H89O4PChemical structure of di-trans,octa-cis-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da
BASm0004072alpha-D-glucosyl di-trans,octa-cis-undecaprenyl diphosphateC61H100O12P2Chemical structure of alpha-D-glucosyl di-trans,octa-cis-undecaprenyl diphosphateNot available
Average1087.408Da
Monoisotopic1086.6701Da

Displaying 1–10 of 26 metabolites

Health Effects

Health ConditionRelationReference
Chronic gastric inflammationCausesPMC10226649
Gastric cancerCausesPMC10226649
Gastric ulcersCausesPMC10420633
Stomach carcinomaCausesPMC10420633
UlcersCausesPMC10420633
AdenocarcinomaCausesPMC10420633
Mucosa-associated lymphoid tissue lymphomaCausesPMC10420633
GerdCausesPMC10712878
GastritisCausesPMC10712878
Gastric cancerCausesPMC10732068

Displaying health effects 1 – 10 of 94 in total