Helicobacter pylori strain 29:2_single

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Helicobacteraceae

Genus

Helicobacter

Description

Helicobacter pylori strain 29:2_single is a Gram-negative bacterium characterized by its spiral shape and solitary cell arrangement. This microbe thrives in microaerophilic conditions, indicating a requirement for reduced oxygen levels, which is typical for many organisms residing in host-associated environments. Optimal growth occurs at a temperature of 37.0°C, aligning with the average body temperature of mammalian hosts, suggesting a close adaptation to its ecological niche. As a member of the genus Helicobacter, strain 29:2_single is likely to exhibit features common to this group, such as the production of urease, which plays a pivotal role in its survival within acidic environments like the stomach. The microbe's ability to inhabit the gastric mucosa underscores its potential for influencing local microbial communities and host physiology. The solitary arrangement of cells may facilitate individual motility and colonization strategies, potentially allowing strain 29:2_single to navigate the complex microenvironments found within its host. This adaptability highlights the intricate relationship between Helicobacter pylori and its host, where the bacterium may contribute to the dynamic balance of the gastric microbiome. Understanding such traits can provide insights into the broader ecological roles of Helicobacter species in health and disease.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyHelicobacteraceae
GenusHelicobacter
SpeciesHelicobacter pylori
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Helicobacter pylori strain 29:2_single

Accession NumberQBPP00000000.1

Gene Summary

Adenine Count

487988 bp

Thymine Count

484223 bp

Guanine Count

309727 bp

Cytosine Count

314303 bp

Genome Length

1596241 bp

Protein-coding Genes

1478 genes

Non-Coding Genes

42 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
16s ribosomal rnaNot AvailableNot Available+379 - 1887Not Available
hypothetical proteinC2S30_00010Not Available-723 - 9207669.97
50s ribosomal protein l19C2S30_00015Not Available-1582 - 193813600.7
trna (guanosine(37)-n1)-methyltransferase trmdC2S30_00020Not Available-1960 - 264925934.5
16s rrna processing protein rimmC2S30_00025Not Available-2650 - 320420789.5
kh domain-containing proteinC2S30_00030Not Available-3205 - 352811897.3
30s ribosomal protein s16C2S30_00035Not Available-3545 - 37758972.0
signal recognition particle proteinC2S30_00040Not Available-3849 - 519549186.1
valine--trna ligaseC2S30_00045Not Available-5210 - 7834101196.0
flagellar assembly protein fliwC2S30_00050Not Available+7963 - 837015605.1

Displaying genes 1 – 10 of 1520 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites