Gemmobacter caeni strain DSM 21823

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Gemmobacter

Description

Gemmobacter caeni strain DSM 21823 is characterized as a Gram-negative, rod-shaped bacterium with a facultative aerobe/anaerobe oxygen requirement. This strain demonstrates mesophilic growth, with an optimal temperature of 32°C. It is notable for being non-motile and non-spore-forming, features that may influence its ecological interactions and survival strategies in various environments. The strain possesses a single replicon, indicating a simpler genetic organization compared to organisms with multiple replicons. This genetic structure may affect its adaptability and evolutionary processes. The absence of sporulation suggests that Gemmobacter caeni may rely on other mechanisms for survival under adverse conditions, potentially making it more susceptible to environmental stresses compared to spore-forming bacteria. In terms of ecological significance, the facultative lifestyle of Gemmobacter caeni allows it to thrive in diverse environments, whether in the presence or absence of oxygen. Such versatility may enable this bacterium to play a role in various biogeochemical cycles, particularly in sedimentary environments where oxygen levels fluctuate. Overall, the traits of Gemmobacter caeni strain DSM 21823 highlight its adaptability and potential ecological roles, particularly in anaerobic or low-oxygen habitats, where its metabolic capabilities could contribute to nutrient cycling and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusGemmobacter
SpeciesGemmobacter caeni
Strainstrain DSM 21823

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gemmobacter caeni strain DSM 21823 Ga0196851_180, whole genome

Gene Summary

Adenine Count

905935 bp

Thymine Count

905819 bp

Guanine Count

1669869 bp

Cytosine Count

1653240 bp

Genome Length

5135347 bp

Protein-coding Genes

5031 genes

Non-Coding Genes

201 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crispr-associated cas3 family helicaseC8N34_1347Not AvailablePositive4880449 - 488297189586.7
crispr system cascade subunit casaC8N34_1348Not AvailablePositive4883328 - 488480652948.9
crispr system cascade subunit casbC8N34_1349Not AvailablePositive4884803 - 488527917795.3
crispr-associated cse4 family proteinC8N34_13410Not AvailablePositive4885276 - 488634637572.6
crispr system cascade subunit casdC8N34_13411Not AvailablePositive4886346 - 488703524773.0
crispr-associated cse3 family proteinC8N34_13412Not AvailablePositive4887032 - 488770324483.5
crispr-associated cas1 family proteinC8N34_13413Not AvailablePositive4887700 - 488864433715.6
crispr-associated protein cas2C8N34_13414Not AvailablePositive4888641 - 488892810657.7
cobq/cobb/mind/para family nucleotide binding proteinC8N34_13415Not AvailableNegative4892737 - 48929768748.57
Trna-metNot AvailableNot AvailablePositive4893123 - 4893199Not Available

Displaying genes 4951 – 4960 of 5232 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.