Gemmobacter caeni strain DSM 21823

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Gemmobacter

Description

Gemmobacter caeni strain DSM 21823 is characterized as a Gram-negative, rod-shaped bacterium with a facultative aerobe/anaerobe oxygen requirement. This strain demonstrates mesophilic growth, with an optimal temperature of 32°C. It is notable for being non-motile and non-spore-forming, features that may influence its ecological interactions and survival strategies in various environments. The strain possesses a single replicon, indicating a simpler genetic organization compared to organisms with multiple replicons. This genetic structure may affect its adaptability and evolutionary processes. The absence of sporulation suggests that Gemmobacter caeni may rely on other mechanisms for survival under adverse conditions, potentially making it more susceptible to environmental stresses compared to spore-forming bacteria. In terms of ecological significance, the facultative lifestyle of Gemmobacter caeni allows it to thrive in diverse environments, whether in the presence or absence of oxygen. Such versatility may enable this bacterium to play a role in various biogeochemical cycles, particularly in sedimentary environments where oxygen levels fluctuate. Overall, the traits of Gemmobacter caeni strain DSM 21823 highlight its adaptability and potential ecological roles, particularly in anaerobic or low-oxygen habitats, where its metabolic capabilities could contribute to nutrient cycling and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusGemmobacter
SpeciesGemmobacter caeni
Strainstrain DSM 21823

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gemmobacter caeni strain DSM 21823 Ga0196851_180, whole genome

Gene Summary

Adenine Count

905935 bp

Thymine Count

905819 bp

Guanine Count

1669869 bp

Cytosine Count

1653240 bp

Genome Length

5135347 bp

Protein-coding Genes

5031 genes

Non-Coding Genes

201 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative dna-binding proteinC8N34_11229Not AvailableNegative3413929 - 341470227178.4
hypothetical proteinC8N34_11230Not AvailableNegative3414686 - 341554331134.2
putative membrane proteinC8N34_11231Not AvailableNegative3415629 - 34159049238.09
rna polymerase sigma-70 factor (ecf subfamily)C8N34_11232Not AvailablePositive3416079 - 341665120926.0
hypothetical proteinC8N34_11233Not AvailablePositive3416648 - 341728321838.6
fad/fmn-containing dehydrogenaseC8N34_11234Not AvailablePositive3417347 - 341873548559.9
trap-type c4-dicarboxylate transport system substrate-binding proteinC8N34_11235Not AvailablePositive3419058 - 342003236019.8
trap-type c4-dicarboxylate transport system permease small subunitC8N34_11236Not AvailablePositive3420176 - 342068819046.2
tripartite atp-independent transporter dctm subunitC8N34_11237Not AvailablePositive3420688 - 342199846402.3
hypothetical proteinC8N34_11238Not AvailablePositive3422010 - 342269624829.7

Displaying genes 3581 – 3590 of 5232 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.