Gemmobacter caeni strain DSM 21823

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Gemmobacter

Description

Gemmobacter caeni strain DSM 21823 is characterized as a Gram-negative, rod-shaped bacterium with a facultative aerobe/anaerobe oxygen requirement. This strain demonstrates mesophilic growth, with an optimal temperature of 32°C. It is notable for being non-motile and non-spore-forming, features that may influence its ecological interactions and survival strategies in various environments. The strain possesses a single replicon, indicating a simpler genetic organization compared to organisms with multiple replicons. This genetic structure may affect its adaptability and evolutionary processes. The absence of sporulation suggests that Gemmobacter caeni may rely on other mechanisms for survival under adverse conditions, potentially making it more susceptible to environmental stresses compared to spore-forming bacteria. In terms of ecological significance, the facultative lifestyle of Gemmobacter caeni allows it to thrive in diverse environments, whether in the presence or absence of oxygen. Such versatility may enable this bacterium to play a role in various biogeochemical cycles, particularly in sedimentary environments where oxygen levels fluctuate. Overall, the traits of Gemmobacter caeni strain DSM 21823 highlight its adaptability and potential ecological roles, particularly in anaerobic or low-oxygen habitats, where its metabolic capabilities could contribute to nutrient cycling and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusGemmobacter
SpeciesGemmobacter caeni
Strainstrain DSM 21823

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gemmobacter caeni strain DSM 21823 Ga0196851_180, whole genome

Gene Summary

Adenine Count

905935 bp

Thymine Count

905819 bp

Guanine Count

1669869 bp

Cytosine Count

1653240 bp

Genome Length

5135347 bp

Protein-coding Genes

5031 genes

Non-Coding Genes

201 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate-ammonia-ligase adenylyltransferaseC8N34_10987Not AvailablePositive2942961 - 294575699966.6
hypothetical proteinC8N34_10988Not AvailablePositive2945746 - 29460129467.31
uridylate kinaseC8N34_10989Not AvailablePositive2946146 - 294688026293.0
ribosome recycling factorC8N34_10990Not AvailablePositive2947006 - 294757221065.4
undecaprenyl pyrophosphate synthetaseC8N34_10991Not AvailablePositive2947606 - 294833427151.3
phosphatidate cytidylyltransferaseC8N34_10992Not AvailablePositive2948331 - 294899322900.5
1-deoxy-d-xylulose 5-phosphate reductoisomeraseC8N34_10993Not AvailablePositive2948995 - 295018541387.9
regulator of sigma e proteaseC8N34_10994Not AvailablePositive2950236 - 295157347120.4
hypothetical proteinC8N34_10995Not AvailablePositive2951656 - 29517965019.27
beta-barrel assembly machine subunit bamaC8N34_10996Not AvailablePositive2951953 - 295433486383.1

Displaying genes 3121 – 3130 of 5232 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.