Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Gemmobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Gemmobacter |
| Species | Gemmobacter caeni |
| Strain | strain DSM 21823 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905935 bp
Thymine Count
905819 bp
Guanine Count
1669869 bp
Cytosine Count
1653240 bp
Genome Length
5135347 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine-binding protein | C8N34_10885 | Not Available | Negative | 2700768 - 2701793 | 37525.4 |
| abc-type spermidine/putrescine transport system permease subunit ii | C8N34_10886 | Not Available | Negative | 2701833 - 2702636 | 28903.9 |
| abc-type spermidine/putrescine transport system permease subunit i | C8N34_10887 | Not Available | Negative | 2702629 - 2703537 | 33357.0 |
| spermidine/putrescine abc transporter atp-binding subunit | C8N34_10888 | Not Available | Negative | 2703541 - 2704605 | 37684.7 |
| amidase/6-aminohexanoate-cyclic-dimer hydrolase | C8N34_10889 | Not Available | Negative | 2704677 - 2706128 | 50173.9 |
| hypothetical protein | C8N34_10890 | Not Available | Negative | 2706216 - 2706521 | 10846.5 |
| ribosomal large subunit pseudouridine synthase d | C8N34_10891 | Not Available | Positive | 2706574 - 2707587 | 36010.1 |
| phosphoribosyl-atp pyrophosphatase | C8N34_10892 | Not Available | Negative | 2707592 - 2707903 | 10919.0 |
| imidazole glycerol phosphate synthase subunit hisf | C8N34_10893 | Not Available | Negative | 2707900 - 2708661 | 26292.4 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | C8N34_10894 | Not Available | Negative | 2708763 - 2709482 | 24720.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
