Gemmobacter caeni strain DSM 21823

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Gemmobacter

Description

Gemmobacter caeni strain DSM 21823 is characterized as a Gram-negative, rod-shaped bacterium with a facultative aerobe/anaerobe oxygen requirement. This strain demonstrates mesophilic growth, with an optimal temperature of 32°C. It is notable for being non-motile and non-spore-forming, features that may influence its ecological interactions and survival strategies in various environments. The strain possesses a single replicon, indicating a simpler genetic organization compared to organisms with multiple replicons. This genetic structure may affect its adaptability and evolutionary processes. The absence of sporulation suggests that Gemmobacter caeni may rely on other mechanisms for survival under adverse conditions, potentially making it more susceptible to environmental stresses compared to spore-forming bacteria. In terms of ecological significance, the facultative lifestyle of Gemmobacter caeni allows it to thrive in diverse environments, whether in the presence or absence of oxygen. Such versatility may enable this bacterium to play a role in various biogeochemical cycles, particularly in sedimentary environments where oxygen levels fluctuate. Overall, the traits of Gemmobacter caeni strain DSM 21823 highlight its adaptability and potential ecological roles, particularly in anaerobic or low-oxygen habitats, where its metabolic capabilities could contribute to nutrient cycling and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusGemmobacter
SpeciesGemmobacter caeni
Strainstrain DSM 21823

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gemmobacter caeni strain DSM 21823 Ga0196851_180, whole genome

Gene Summary

Adenine Count

905935 bp

Thymine Count

905819 bp

Guanine Count

1669869 bp

Cytosine Count

1653240 bp

Genome Length

5135347 bp

Protein-coding Genes

5031 genes

Non-Coding Genes

201 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative tricarboxylic transport membrane proteinC8N34_106227Not AvailableNegative2259590 - 226108052839.3
hypothetical proteinC8N34_106228Not AvailableNegative2261089 - 226170322434.8
tripartite-type tricarboxylate transporter receptor subunit tctcC8N34_106229Not AvailableNegative2261826 - 226275832848.4
iclr family transcriptional regulatorC8N34_106230Not AvailablePositive2262878 - 226366927893.3
gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenaseC8N34_106231Not AvailablePositive2263759 - 226523451509.8
putative hydrolase of the had superfamilyC8N34_106232Not AvailablePositive2265219 - 226588124121.8
hypothetical proteinC8N34_106233Not AvailablePositive2265886 - 226723848253.9
4-methylaminobutanoate oxidase (formaldehyde-forming)C8N34_106234Not AvailableNegative2267293 - 226977390576.0
nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family)C8N34_106235Not AvailablePositive2269991 - 227076426601.0
iclr family transcriptional regulatorC8N34_106236Not AvailableNegative2270761 - 227155227685.0

Displaying genes 2501 – 2510 of 5232 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.