Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Gemmobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Gemmobacter |
| Species | Gemmobacter caeni |
| Strain | strain DSM 21823 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905935 bp
Thymine Count
905819 bp
Guanine Count
1669869 bp
Cytosine Count
1653240 bp
Genome Length
5135347 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil phosphoribosyltransferase | C8N34_106157 | Not Available | Negative | 2194278 - 2194910 | 23079.3 |
| adenosine deaminase | C8N34_106158 | Not Available | Negative | 2194907 - 2195896 | 36266.7 |
| phosphopentomutase | C8N34_106159 | Not Available | Negative | 2195893 - 2197089 | 42067.8 |
| thymidine phosphorylase | C8N34_106160 | Not Available | Negative | 2197086 - 2198399 | 44432.8 |
| cytidine deaminase | C8N34_106161 | Not Available | Negative | 2198396 - 2198803 | 13861.4 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | C8N34_106162 | Not Available | Positive | 2199050 - 2201329 | 81616.6 |
| propionyl-coa synthetase | C8N34_106163 | Not Available | Positive | 2201587 - 2203479 | 68808.7 |
| nad+ kinase | C8N34_106164 | Not Available | Negative | 2203571 - 2204326 | 27218.7 |
| serine hydroxymethyltransferase | C8N34_106165 | Not Available | Positive | 2204532 - 2205824 | 45772.6 |
| uncharacterized membrane protein yoat (duf817 family) | C8N34_106166 | Not Available | Positive | 2205932 - 2206828 | 34044.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
