Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Gemmobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Gemmobacter |
| Species | Gemmobacter caeni |
| Strain | strain DSM 21823 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
905935 bp
Thymine Count
905819 bp
Guanine Count
1669869 bp
Cytosine Count
1653240 bp
Genome Length
5135347 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
201 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/d-amino acid oxidase-like deaminating enzyme | C8N34_105220 | Not Available | Positive | 2008113 - 2009402 | 45469.0 |
| ornithine cyclodeaminase | C8N34_105221 | Not Available | Positive | 2009404 - 2010387 | 34229.2 |
| gntr family transcriptional regulator | C8N34_105222 | Not Available | Positive | 2010651 - 2011346 | 25432.3 |
| amino acid/amide abc transporter membrane protein 2 (haat family) | C8N34_105223 | Not Available | Negative | 2011367 - 2012311 | 33182.6 |
| amino acid/amide abc transporter membrane protein 1 (haat family) | C8N34_105224 | Not Available | Negative | 2012319 - 2013221 | 31583.8 |
| branched-chain amino acid transport system atp-binding protein | C8N34_105225 | Not Available | Negative | 2013218 - 2013946 | 25507.2 |
| branched-chain amino acid transport system atp-binding protein/neutral amino acid transport system atp-binding protein | C8N34_105226 | Not Available | Negative | 2013943 - 2014716 | 28176.4 |
| aspartate aminotransferase | C8N34_105227 | Not Available | Negative | 2014713 - 2015900 | 43061.6 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | C8N34_105228 | Not Available | Negative | 2015897 - 2016283 | 13754.2 |
| hypothetical protein | C8N34_105229 | Not Available | Negative | 2016338 - 2016523 | 6583.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
