Gemmobacter caeni strain DSM 21823

rodfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Gemmobacter

Description

Gemmobacter caeni strain DSM 21823 is characterized as a Gram-negative, rod-shaped bacterium with a facultative aerobe/anaerobe oxygen requirement. This strain demonstrates mesophilic growth, with an optimal temperature of 32°C. It is notable for being non-motile and non-spore-forming, features that may influence its ecological interactions and survival strategies in various environments. The strain possesses a single replicon, indicating a simpler genetic organization compared to organisms with multiple replicons. This genetic structure may affect its adaptability and evolutionary processes. The absence of sporulation suggests that Gemmobacter caeni may rely on other mechanisms for survival under adverse conditions, potentially making it more susceptible to environmental stresses compared to spore-forming bacteria. In terms of ecological significance, the facultative lifestyle of Gemmobacter caeni allows it to thrive in diverse environments, whether in the presence or absence of oxygen. Such versatility may enable this bacterium to play a role in various biogeochemical cycles, particularly in sedimentary environments where oxygen levels fluctuate. Overall, the traits of Gemmobacter caeni strain DSM 21823 highlight its adaptability and potential ecological roles, particularly in anaerobic or low-oxygen habitats, where its metabolic capabilities could contribute to nutrient cycling and ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusGemmobacter
SpeciesGemmobacter caeni
Strainstrain DSM 21823

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gemmobacter caeni strain DSM 21823 Ga0196851_180, whole genome

Gene Summary

Adenine Count

905935 bp

Thymine Count

905819 bp

Guanine Count

1669869 bp

Cytosine Count

1653240 bp

Genome Length

5135347 bp

Protein-coding Genes

5031 genes

Non-Coding Genes

201 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-methylhydantoinase bC8N34_105210Not AvailablePositive1993385 - 199510660868.4
trap-type c4-dicarboxylate transport system substrate-binding proteinC8N34_105211Not AvailablePositive1995177 - 199616935488.6
trap-type mannitol/chloroaromatic compound transport system permease small subunitC8N34_105212Not AvailablePositive1996166 - 199674120731.6
tripartite atp-independent transporter dctm subunitC8N34_105213Not AvailablePositive1996763 - 199807645890.1
hydroxypyruvate reductaseC8N34_105214Not AvailablePositive1998520 - 199977941992.5
lysr family transcriptional regulatorC8N34_105215Not AvailableNegative2000406 - 200131133462.5
agmatinaseC8N34_105216Not AvailablePositive2001406 - 200238334923.9
sss family solute:na+ symporterC8N34_105217Not AvailablePositive2002522 - 200389248066.6
branched-chain amino acid transport system substrate-binding proteinC8N34_105218Not AvailablePositive2004526 - 200580344192.7
biotin/methionine sulfoxide reductaseC8N34_105219Not AvailablePositive2005819 - 200811683904.5

Displaying genes 2221 – 2230 of 5232 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.