Pontibacter mucosus strain DSM 100162

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter mucosus strain DSM 100162 is a Gram-negative, aerobic bacterium characterized by its rod shape and motility. This strain thrives optimally at a temperature of 29°C, placing it within the mesophilic temperature range, which is conducive to growth in moderate temperature environments. The strain is noted for having a single replicon, indicating a streamlined genomic organization. The accession number for this strain is QBKI00000000.1, providing a reference for further genomic and taxonomic studies. Ecologically, the traits of Pontibacter mucosus suggest its potential role in environments where aerobic conditions prevail, such as soil or aquatic systems. Its mesophilic nature implies it may be well-adapted to temperate climates, contributing to nutrient cycling and possibly influencing microbial community dynamics in these habitats. The motility of the organism may also enhance its ability to colonize and exploit various ecological niches, indicating a potential for interaction with other microbial species and the environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter mucosus
Strainstrain DSM 100162

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter mucosus strain DSM 100162 Ga0183470_123, whole genome

Gene Summary

Adenine Count

1239098 bp

Thymine Count

1241146 bp

Guanine Count

1373499 bp

Cytosine Count

1378207 bp

Genome Length

5231950 bp

Protein-coding Genes

4403 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
radical sam superfamily enzyme ygiq (upf0313 family)C8N40_109118Not AvailablePositive4058974 - 406051858764.6
hypothetical proteinC8N40_109119Not AvailableNegative4060387 - 406077314054.0
nuclease a inhibitor-like proteinC8N40_109120Not AvailableNegative4061342 - 406174614941.5
endonuclease gC8N40_109121Not AvailableNegative4061769 - 406262030965.1
dna polymerase vC8N40_109122Not AvailableNegative4062741 - 406401246919.4
sos response umud proteinC8N40_109123Not AvailableNegative4064009 - 406447016388.7
putative sos response-associated peptidase yedkC8N40_109124Not AvailableNegative4064545 - 406523726249.1
uncharacterized protein yece (duf72 family)C8N40_109125Not AvailableNegative4065609 - 406635529168.8
hypothetical proteinC8N40_109126Not AvailablePositive4066936 - 406723510820.3
beta-aspartyl-peptidase (threonine type)C8N40_109127Not AvailablePositive4067363 - 406831033625.1

Displaying genes 3441 – 3450 of 4464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.