Pontibacter mucosus strain DSM 100162

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter mucosus strain DSM 100162 is a Gram-negative, aerobic bacterium characterized by its rod shape and motility. This strain thrives optimally at a temperature of 29°C, placing it within the mesophilic temperature range, which is conducive to growth in moderate temperature environments. The strain is noted for having a single replicon, indicating a streamlined genomic organization. The accession number for this strain is QBKI00000000.1, providing a reference for further genomic and taxonomic studies. Ecologically, the traits of Pontibacter mucosus suggest its potential role in environments where aerobic conditions prevail, such as soil or aquatic systems. Its mesophilic nature implies it may be well-adapted to temperate climates, contributing to nutrient cycling and possibly influencing microbial community dynamics in these habitats. The motility of the organism may also enhance its ability to colonize and exploit various ecological niches, indicating a potential for interaction with other microbial species and the environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter mucosus
Strainstrain DSM 100162

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter mucosus strain DSM 100162 Ga0183470_123, whole genome

Gene Summary

Adenine Count

1239098 bp

Thymine Count

1241146 bp

Guanine Count

1373499 bp

Cytosine Count

1378207 bp

Genome Length

5231950 bp

Protein-coding Genes

4403 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3,4-dihydroxy-2-butanone 4-phosphate synthaseC8N40_105313Not AvailableNegative2894911 - 289615845743.5
dna primaseC8N40_105314Not AvailableNegative2897166 - 289907971973.0
wd40 repeat proteinC8N40_105315Not AvailablePositive2899887 - 2903825144109.0
o-acetyl-adp-ribose deacetylase (regulator of rnase iii)C8N40_105316Not AvailableNegative2904426 - 290495318703.3
atp-binding protein involved in chromosome partitioningC8N40_105317Not AvailablePositive2905096 - 290619938902.1
fe-s cluster biogenesis protein nfuaC8N40_105318Not AvailablePositive2906206 - 29064759587.71
fumarylacetoacetate hydrolaseC8N40_105319Not AvailablePositive2906974 - 290824547732.5
flavin reductase (dim6/ntab) family nadh-fmn oxidoreductase rutfC8N40_105320Not AvailablePositive2908388 - 290928732876.7
flaa1/epsc-like ndp-sugar epimeraseC8N40_105321Not AvailableNegative2909697 - 291162873115.8
hypothetical proteinC8N40_105322Not AvailablePositive2912160 - 29124238969.15

Displaying genes 2481 – 2490 of 4464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.