Pontibacter mucosus strain DSM 100162

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Pontibacter mucosus strain DSM 100162 is a Gram-negative, aerobic bacterium characterized by its rod shape and motility. This strain thrives optimally at a temperature of 29°C, placing it within the mesophilic temperature range, which is conducive to growth in moderate temperature environments. The strain is noted for having a single replicon, indicating a streamlined genomic organization. The accession number for this strain is QBKI00000000.1, providing a reference for further genomic and taxonomic studies. Ecologically, the traits of Pontibacter mucosus suggest its potential role in environments where aerobic conditions prevail, such as soil or aquatic systems. Its mesophilic nature implies it may be well-adapted to temperate climates, contributing to nutrient cycling and possibly influencing microbial community dynamics in these habitats. The motility of the organism may also enhance its ability to colonize and exploit various ecological niches, indicating a potential for interaction with other microbial species and the environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter mucosus
Strainstrain DSM 100162

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter mucosus strain DSM 100162 Ga0183470_123, whole genome

Gene Summary

Adenine Count

1239098 bp

Thymine Count

1241146 bp

Guanine Count

1373499 bp

Cytosine Count

1378207 bp

Genome Length

5231950 bp

Protein-coding Genes

4403 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseC8N40_10542Not AvailableNegative2543992 - 254484332316.5
lycopene cyclase domain-containing proteinC8N40_10543Not AvailableNegative2544849 - 254554727017.9
hypothetical proteinC8N40_10544Not AvailableNegative2545683 - 254621620380.8
phytoene/squalene synthetaseC8N40_10545Not AvailableNegative2546217 - 254705332502.4
phytoene desaturaseC8N40_10546Not AvailableNegative2547071 - 254856756197.3
rna polymerase sigma-70 factor (ecf subfamily)C8N40_10547Not AvailableNegative2548592 - 254910719816.9
dna-binding transcriptional merr regulatorC8N40_10548Not AvailableNegative2549357 - 255023233831.0
beta-carotene 3-hydroxylaseC8N40_10549Not AvailableNegative2550213 - 255070419219.6
methylglutaconyl-coa hydrataseC8N40_10550Not AvailableNegative2550754 - 255156330329.6
tetr family transcriptional regulatorC8N40_10551Not AvailablePositive2551739 - 255233222482.0

Displaying genes 2211 – 2220 of 4464 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.